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coder.module in Coder 5

Developer Module that assists with code review and version upgrade that supports a plug-in extensible hook system so contributed modules can define additional review standards.

Built-in support for:

Credit also to dries:

File

coder.module
View source
<?php

/** @file
 * Developer Module that assists with code review and version upgrade that
 * supports a plug-in extensible hook system so contributed modules can
 * define additional review standards.
 *
 * Built-in support for:
 * - Drupal Coding Standards - http://drupal.org/node/318
 * - Handle text in a secure fashion - http://drupal.org/node/28984
 * - Converting 4.6.x modules to 4.7.x - http://drupal.org/node/22218
 * - Converting 4.7.x modules to 5.x - http://drupal.org/node/64279
 *
 * Credit also to dries:
 * - http://cvs.drupal.org/viewcvs/drupal/drupal/scripts/code-style.pl
 */

/**
 * Implementation of hook_help().
 */
function coder_help($section) {
  switch ($section) {
    case 'coder#disclaimer':
      return t('Coder provides helpful hints without false positives, but offers no guarantee for creating good code.  You are the final arbitrar.  If in doubt, read the Drupal documentation (see review links below and <a href="@api">api.drupal.org</a>).', array(
        '@api' => 'http://api.drupal.org',
      ));
    default:
      return;
  }
}

/**
 * Get all of the code review modules
 */
function _coder_reviews() {

  // get the contributed module review definitions
  return module_invoke_all('reviews');
}
function coder_reviews() {
  global $_coder_reviews;
  if (!isset($_coder_reviews)) {
    $_coder_reviews = array();
    $path = drupal_get_path('module', 'coder') . '/includes';
    $files = drupal_system_listing('coder_.*\\.inc$', $path, 'name', 0);
    foreach ($files as $file) {
      require_once './' . $file->filename;
      $function = $file->name . '_reviews';
      if (function_exists($function)) {
        if ($review = call_user_func($function)) {
          $_coder_reviews = array_merge($_coder_reviews, $review);
        }
      }
    }
  }
  return $_coder_reviews;
}

/**
 * Implementation of hook_cron().
 */
function coder_cron() {
  if ($use_cache = variable_get('coder_cache', 1)) {

    // TODO: move some of the work here... is this really worth it?
  }
}

/**
 * Implementation of hook_perm().
 */
function coder_perm() {
  return array(
    'view code review',
    'view code review all',
  );
}

/**
 * Implementation of hook_menu().
 */
function coder_menu($may_cache = true) {
  $items = array();
  $items[] = array(
    'path' => 'coder',
    'title' => t('Code review'),
    'callback' => 'coder_page',
    'access' => user_access('view code review'),
    'type' => MENU_NORMAL_ITEM,
  );
  $items[] = array(
    'path' => 'coder/settings',
    'title' => t('Selection Form'),
    'callback' => 'coder_page',
    'access' => user_access('view code review'),
    'type' => MENU_DEFAULT_LOCAL_TASK,
    'weight' => -2,
  );
  $items[] = array(
    'path' => 'coder/default',
    'title' => t('Default'),
    'callback' => 'coder_page',
    'access' => user_access('view code review'),
    'type' => MENU_LOCAL_TASK,
    'weight' => -1,
  );
  $items[] = array(
    'path' => 'coder/core',
    'title' => t('Core'),
    'callback' => 'coder_page',
    'access' => user_access('view code review'),
    'type' => MENU_LOCAL_TASK,
  );
  $items[] = array(
    'path' => 'coder/active',
    'title' => t('Active'),
    'callback' => 'coder_page',
    'access' => user_access('view code review'),
    'type' => MENU_LOCAL_TASK,
  );
  $items[] = array(
    'path' => 'coder/all',
    'title' => t('All'),
    'callback' => 'coder_page',
    'access' => user_access('view code review all'),
    'type' => MENU_LOCAL_TASK,
    'weight' => 1,
  );
  $items[] = array(
    'path' => 'admin/settings/coder',
    'title' => t('Code review'),
    'description' => t('Select code review plugins and modules'),
    'callback' => 'drupal_get_form',
    'callback arguments' => 'coder_admin_settings',
    'access' => user_access('administer site configuration'),
  );
  return $items;
}

/**
 * Implementation of hook_form_alter().
 */
function coder_form_alter($form_id, &$form) {
  if ($form_id == 'system_modules' && $form['#base'] != 'confirm_form') {
    if (user_access('view code review')) {
      $path = drupal_get_path('module', 'coder');
      drupal_add_css($path . '/coder.css', 'module');
      foreach ($form['name'] as $name => $data) {
        $form['description'][$name]['#value'] = $form['description'][$name]['#value'] . '(' . l(t('Code Review'), "coder/{$name}") . ')';
      }
    }
  }
}

/**
 * Helper functions for settings form
 */
function _coder_default_reviews() {
  return drupal_map_assoc(array(
    'style',
    'comment',
    'security',
  ));
}
function _coder_settings_form($settings, &$system, &$files) {

  // add the javascript
  $path = drupal_get_path('module', 'coder');
  drupal_add_js($path . '/coder.js');

  // create the list of review options from the coder review plug-ins
  // maintain a secondary list based on #title only, to make sorting possible
  $reviews = _coder_reviews();
  foreach ($reviews as $name => $review) {
    $review_options[$name] = l($review['#title'], $review['#link']);
    if (isset($review['#description'])) {
      $review_options[$name] .= ' (' . $review['#description'] . ')';
    }
    $review_sort[$name] = $review['#title'];
  }

  // sort the reviews by #title
  asort($review_sort);
  foreach ($review_sort as $name => $review) {
    $review_sort[$name] = $review_options[$name];
  }

  // what reviews should be used?
  $form['coder_reviews_group'] = array(
    '#type' => 'fieldset',
    '#title' => t('Reviews'),
    '#collapsible' => true,
    '#collapsed' => false,
  );
  $form['coder_reviews_group']['coder_reviews'] = array(
    '#type' => 'checkboxes',
    '#options' => $review_sort,
    '#description' => t('apply the checked coding reviews'),
    '#default_value' => $settings['coder_reviews'],
  );

  // what severities should be used?
  $form['coder_reviews_group']['coder_severity'] = array(
    '#type' => 'radios',
    '#options' => array(
      1 => 'minor (most)',
      5 => 'normal',
      9 => 'critical (fewest)',
    ),
    '#description' => t('show warnings at or above the severity warning level'),
    '#default_value' => $settings['coder_severity'],
  );

  // get the modules and theme
  $sql = 'SELECT name, filename, type, status FROM {system} WHERE type=\'module\' OR type=\'theme\' ORDER BY weight ASC, filename ASC';
  $result = db_query($sql);
  $system_modules = array();
  $system_themes = array();
  while ($system = db_fetch_object($result)) {
    $display_name = $system->name;
    if ($system->status) {
      $display_name .= t(' (active)');
      $system_active[$system->name] = $system->name;
    }
    if (_coder_is_drupal_core($system)) {
      $display_name .= t(' (core)');
      $system_core[$system->name] = $system->name;
    }
    if ($system->type == 'module') {
      $system_modules[$system->name] = $system->name;
    }
    else {
      $system_themes[$system->name] = $system->name;
    }
    $system_links[$system->name] = l($display_name, "coder/{$system->name}");
    $files[$system->name] = $system->filename;
  }
  asort($system_links);

  // display what to review options
  $form['coder_what'] = array(
    '#type' => 'fieldset',
    '#title' => t('What to review'),
    '#collapsible' => true,
    '#collapsed' => false,
  );
  $form['coder_what']['coder_active_modules'] = array(
    // NOTE: should rename var
    '#type' => 'checkbox',
    '#default_value' => isset($settings['coder_active_modules']) ? $settings['coder_active_modules'] : 0,
    '#title' => t('active modules and themes'),
  );
  $form['coder_what']['coder_core'] = array(
    '#type' => 'checkbox',
    '#default_value' => isset($settings['coder_core']) ? $settings['coder_core'] : 0,
    '#title' => t('core files (php, modules, and includes)'),
  );
  $form['coder_what']['coder_includes'] = array(
    '#type' => 'checkbox',
    '#default_value' => $settings['coder_includes'],
    '#title' => t('include files (.inc and .php files)'),
  );
  if (arg(0) == 'admin') {
    $form['coder_what']['coder_cache'] = array(
      '#type' => 'checkbox',
      '#default_value' => $settings['coder_cache'],
      '#title' => t('use the experimental coder cache'),
    );
  }

  // display the modules in a fieldset
  $form['coder_what']['coder_modules'] = array(
    '#type' => 'fieldset',
    '#title' => t('Select Specific Modules'),
    '#collapsible' => true,
    '#collapsed' => true,
  );
  if (isset($settings['coder_all'])) {
    $modules = $system_modules;
  }
  elseif (isset($settings['coder_active_modules']) && $settings['coder_active_modules']) {
    if (isset($settings['coder_core']) && $settings['coder_core']) {
      $modules = array_intersect($system_active, $system_core);
      $modules = array_intersect($modules, $system_modules);
    }
    else {
      $modules = array_intersect($system_active, $system_modules);
    }
  }
  elseif (isset($settings['coder_core']) && $settings['coder_core']) {
    $modules = array_intersect($system_core, $system_modules);
  }
  elseif (isset($settings['coder_active_modules']) && $settings['coder_active_modules']) {
    $modules = array_intersect($system_active, $system_modules);
  }
  else {
    $modules = isset($settings['coder_modules']) && is_array($settings['coder_modules']) ? $settings['coder_modules'] : array();
  }

  // display the themes in a fieldset
  $form['coder_what']['coder_themes'] = array(
    '#type' => 'fieldset',
    '#title' => t('Select Specific Themes'),
    '#collapsible' => true,
    '#collapsed' => true,
  );
  if (isset($settings['coder_all'])) {
    $themes = $system_themes;
  }
  elseif (isset($settings['coder_active_modules']) && $settings['coder_active_modules']) {
    if (isset($settings['coder_core']) && $settings['coder_core']) {
      $themes = array_intersect($system_active, $system_core);
      $themes = array_intersect($themes, $system_themes);
    }
    else {
      $themes = array_intersect($system_active, $system_themes);
    }
  }
  elseif (isset($settings['coder_core']) && $settings['coder_core']) {
    $themes = array_intersect($system_core, $system_themes);
  }
  elseif (isset($settings['coder_active_modules']) && $settings['coder_active_modules']) {
    $themes = array_intersect($system_active, $system_themes);
  }
  else {
    $themes = isset($settings['coder_themes']) && is_array($settings['coder_themes']) ? $settings['coder_themes'] : array();
  }
  foreach ($system_links as $name => $link) {
    $classes = array();
    if (in_array($name, $system_active)) {
      $classes[] = 'coder-active';
    }
    if (in_array($name, $system_core)) {
      $classes[] = 'coder-core';
    }
    if (in_array($name, $system_themes)) {
      $type = 'theme';
      $default_value = isset($themes[$name]);
    }
    else {
      $type = 'module';
      $default_value = isset($modules[$name]);
    }
    $form['coder_what']["coder_{$type}s"]["coder_{$type}s-{$name}"] = array(
      '#type' => 'checkbox',
      '#title' => $link,
      '#default_value' => $default_value,
      '#attributes' => array(
        'class' => implode(' ', $classes),
      ),
    );
  }
  $system = array_merge($modules, $themes);
  return $form;
}

/**
 * Implementation of settings page for Drupal 5
 */
function coder_admin_settings() {
  $settings = _coder_get_default_settings();
  $form = _coder_settings_form($settings, $system, $files);
  $form['#submit']['coder_settings_form_submit'] = array();
  $form['#submit']['system_settings_form_submit'] = array();
  return system_settings_form($form);
}
function coder_settings_form_submit($form_id, &$form_values) {
  variable_set('coder_modules', _coder_settings_array($form_values, 'module'));
  variable_set('coder_themes', _coder_settings_array($form_values, 'theme'));
}
function _coder_settings_array(&$form_values, $type) {
  $typekey = "coder_{$type}s-";
  $typelen = strlen($typekey);
  $systems = array();
  foreach ($form_values as $key => $value) {
    if (substr($key, 0, $typelen) == $typekey) {
      if ($value == 1) {
        $system = substr($key, $typelen);
        $systems[$system] = 1;
      }
      unset($form_values[$key]);
    }
  }
  return $systems;
}
function coder_page_form_submit($form_id, $form_values) {

  // HELP: is there a better way to get these to coder_page_form()???
  return false;
}

/**
 * Implementation of code review page
 */
function coder_page() {
  $output = '<div class="coder-disclaimer">' . coder_help('coder#disclaimer') . '</div>';
  $output .= drupal_get_form('coder_page_form');
  return $output;
}
function _coder_get_default_settings($args = 'default') {
  $settings['coder_reviews'] = variable_get('coder_reviews', _coder_default_reviews());
  $settings['coder_severity'] = variable_get('coder_severity', 5);
  $settings['coder_cache'] = variable_get('coder_cache', 1);

  // determine any options based on the passed in URL,
  switch ($args) {
    case 'settings':
      $settings['coder_includes'] = 1;
      break;
    case 'active':
      $settings['coder_active_modules'] = 1;
      break;
    case 'core':
      $settings['coder_core'] = 1;
      $settings['coder_includes'] = 1;
      break;
    case 'all':
      $settings['coder_core'] = 1;
      $settings['coder_includes'] = 1;
      $settings['coder_all'] = 1;
      break;
    case 'default':
      $settings['coder_active_modules'] = variable_get('coder_active_modules', 1);
      $settings['coder_core'] = variable_get('coder_core', 0);
      $settings['coder_includes'] = variable_get('coder_includes', 0);
      $settings['coder_modules'] = variable_get('coder_modules', array());
      $settings['coder_themes'] = variable_get('coder_themes', array());
      break;
    default:
      $settings['coder_includes'] = 1;

      // TODO: does this need to go into coder_themes sometimes?
      $settings['coder_modules'] = array(
        $args => $args,
      );
      break;
  }
  return $settings;
}
function coder_page_form() {

  // HELP: is there a better way to get these from coder_page_form_submit()???
  $form_values = $_POST;
  if (isset($form_values['op'])) {
    $settings = $form_values;
    $settings['coder_modules'] = _coder_settings_array($form_values, 'module');
    $settings['coder_themes'] = _coder_settings_array($form_values, 'theme');
    drupal_set_title(t('Code review (submitted options)'));
  }
  else {
    $options = arg(1);
    $settings = _coder_get_default_settings($options);
    if ($options) {
      drupal_set_title(t('Code review (@options)', array(
        '@options' => isset($options) ? $options : 'default options',
      )));
    }
  }

  // get this once - list of the reviews to perform
  $reviews = array();
  $avail_reviews = _coder_reviews();
  $selected_reviews = $settings['coder_reviews'];
  foreach ($selected_reviews as $name => $checked) {
    if ($checked) {
      $reviews[$name] = $avail_reviews[$name];
    }
  }
  if ($coder_form = _coder_settings_form($settings, $system, $files)) {

    // add style sheet
    $path = drupal_get_path('module', 'coder');
    drupal_add_css($path . '/coder.css', 'module');

    // code review non-module core files
    $module_weight = 0;
    if (isset($settings['coder_core']) && $settings['coder_core']) {
      $coder_args = array(
        '#reviews' => $reviews,
        '#severity' => $settings['coder_severity'],
      );
      $form['core_php'] = array(
        '#type' => 'fieldset',
        '#title' => 'core (php)',
        '#collapsible' => true,
        '#collapsed' => true,
        '#weight' => ++$module_weight,
      );
      $phpfiles = file_scan_directory('.', '.*\\.php', array(
        '.',
        '..',
        'CVS',
      ), 0, false, 'name', 0);
      _coder_page_form_includes($form, $coder_args, 'core_php', $phpfiles, 2);
      $form['core_includes'] = array(
        '#type' => 'fieldset',
        '#title' => 'core (includes)',
        '#collapsible' => true,
        '#collapsed' => true,
        '#weight' => ++$module_weight,
      );
      $includefiles = drupal_system_listing('.*\\.inc$', 'includes', 'name', 0);
      _coder_page_form_includes($form, $coder_args, 'core_includes', $includefiles, 0);
    }

    // loop through the selected modules and themes
    if (isset($system)) {
      $dups = array();

      // used to avoid duplicate includes
      $stats = array();
      foreach ($system as $name => $checked) {
        if ($checked) {

          // process this one file
          $filename = $files[$name];
          if (!$filename) {
            drupal_set_message(t('Code Review file for %module not found', array(
              '%module' => $name,
            )));
            continue;
          }
          $coder_args = array(
            '#reviews' => $reviews,
            '#severity' => $settings['coder_severity'],
            '#filename' => $filename,
          );
          $results = do_coder_reviews($coder_args);
          $stats[$filename] = $results['#stats'];
          unset($results['#stats']);

          // output the results in a collapsible fieldset
          $form[$name] = array(
            '#type' => 'fieldset',
            '#title' => $filename,
            '#collapsible' => true,
            '#collapsed' => true,
            '#weight' => ++$module_weight,
          );
          if (empty($results)) {
            $results[] = t('No Problems Found');
          }
          else {
            $form[$name]['#collapsed'] = false;
          }
          $form[$name]['output'] = array(
            '#value' => theme('coder', $name, $filename, $results),
            '#weight' => -1,
          );

          // process the same directory include files
          if ($settings['coder_includes']) {

            // NOTE: convert to the realpath here so drupal_system_listing
            // doesn't return additional paths (i.e., try "module").
            $path = str_replace('\\', '/', dirname(realpath($filename)));
            $offset = strpos($path, dirname($filename));
            if (!isset($dups[$path])) {
              if (substr($filename, -7) == '.module') {
                $coder_args['#php_minor'] = 1;
              }
              $dups[$path] = 1;
              $includefiles = drupal_system_listing('.*\\.(inc|php|install|schema)$', $path, 'name', 0);
              $stats[$filename]['#includes'] = _coder_page_form_includes($form, $coder_args, $name, $includefiles, $offset);
            }
          }
        }
      }
      if (count($stats)) {
        $summary = array(
          'files' => 0,
          'minor' => 0,
          'normal' => 0,
          'critical' => 0,
        );
        foreach ($stats as $stat) {
          if (isset($stat['#includes'])) {
            foreach ($stat['#includes'] as $includestat) {
              $summary['files']++;
              $summary['minor'] += $includestat['minor'];
              $summary['normal'] += $includestat['normal'];
              $summary['critical'] += $includestat['critical'];
            }
          }
          $summary['files']++;
        }
        $display = array();
        $display[] = t('Coder found @count projects', array(
          '@count' => count($stats),
        ));
        $display[] = t('@count files', array(
          '@count' => $summary['files'],
        ));
        foreach (array(
          'critical',
          'normal',
          'minor',
        ) as $severity_name) {
          if ($summary[$severity_name] > 0) {
            $display[] = t('@count %severity_name warnings', array(
              '@count' => $summary[$severity_name],
              '%severity_name' => $severity_name,
            ));
          }
        }
        drupal_set_message(implode(', ', $display));
      }
    }

    // prepend the settings form
    $form['settings'] = array(
      '#type' => 'fieldset',
      '#title' => t('Selection Form'),
      '#collapsible' => true,
      '#collapsed' => isset($form),
      '#weight' => -1,
    );
    if ($form['settings']['#collapsed']) {
      $form['settings']['#prefix'] = t('<div class="coder-settings">Use the Selection Form to select options for this code review, or change the <a href="@settings">Default Settings</a> and use the <a href="@default">Default</a> tab above.</div>', array(
        '@settings' => url('admin/settings/coder'),
        '@default' => url('coder/default'),
      ));
    }
    $form['settings'][] = $coder_form;
    $form['settings']['submit'] = array(
      '#type' => 'submit',
      '#value' => t('Submit'),
    );
    $form['#action'] = url('coder');
  }
  return $form;
}
function _coder_page_form_includes(&$form, $coder_args, $name, $files, $offset) {
  $stats = array();
  $coder_args['#name'] = $name;
  $weight = 0;
  foreach ($files as $file) {
    $filename = drupal_substr($file->filename, $offset);
    $coder_args['#filename'] = $filename;
    $results = do_coder_reviews($coder_args);
    $stats[$filename] = $results['#stats'];
    unset($results['#stats']);

    // output the results in a collapsible fieldset
    $form[$name][$filename] = array(
      '#type' => 'fieldset',
      '#title' => $filename,
      '#collapsible' => true,
      '#collapsed' => true,
      '#weight' => ++$weight,
    );
    if (empty($results)) {
      $results[] = t('No Problems Found');
    }
    else {
      $form[$name][$filename]['#collapsed'] = false;
      $form[$name]['#collapsed'] = false;
    }
    $form[$name][$filename]['output'] = array(
      '#value' => theme('coder', $name, $filename, $results),
    );
  }
  return $stats;
}
function _coder_modified() {
  static $_coder_mtime;
  if (!isset($_coder_mtime)) {
    $path = drupal_get_path('module', 'coder');
    $includefiles = drupal_system_listing('.*\\.(inc|module)$', $path . '/includes', 'name', 0);
    $_coder_mtime = filemtime(realpath($path . '/coder.module'));
    foreach ($includefiles as $file) {
      $mtime = filemtime(realpath($file->filename));
      if ($mtime > $_coder_mtime) {
        $_coder_mtime = $mtime;
      }
    }
  }
  return $_coder_mtime;
}
function do_coder_reviews($coder_args) {

  // the cache is still experimental, so users must enable it
  if ($use_cache = variable_get('coder_cache', 1)) {

    // cache the results because:
    $cache_key = 'coder:' . implode(':', array_keys($coder_args['#reviews'])) . $coder_args['#severity'] . ':' . $coder_args['#filename'];
    $cache_mtime = filemtime(realpath($coder_args['#filename']));
    if ($cache_results = cache_get($cache_key)) {
      if ($cache_results->data['mtime'] == $cache_mtime && ($x = _coder_modified()) < $cache_results->created) {
        return unserialize($cache_results->data['results']);
      }
    }
  }
  $results = array(
    '#stats' => array(
      'minor' => 0,
      'normal' => 0,
      'critical' => 0,
    ),
  );

  // skip php include files when the user requested severity is above minor
  if (isset($coder_args['#php_minor']) && drupal_substr($coder_args['#filename'], -4) == '.php') {
    if ($coder_args['#severity'] > 1) {
      return $results;
    }
  }

  // read the file
  if (_coder_read_and_parse_file($coder_args)) {

    // do all of the code reviews
    foreach ($coder_args['#reviews'] as $review) {
      if ($result = do_coder_review($coder_args, $review)) {
        $results += $result;
      }
    }

    // sort the results
    ksort($results, SORT_NUMERIC);
  }
  else {
    _coder_error_msg($results, t('Could not read the file'), 'critical');
  }

  // save the results in the cache
  if ($use_cache) {
    $cache_results = array(
      'mtime' => $cache_mtime,
      'results' => $results,
    );
    cache_set($cache_key, 'cache', serialize($cache_results));
  }
  return $results;
}
function _coder_read_and_parse_file(&$coder_args) {

  // get the path to the module file
  if ($filepath = realpath($coder_args['#filename'])) {

    // read the file
    $content = file_get_contents($filepath) . "\n";
    $content_length = drupal_strlen($content);
    $in_comment = 0;
    $beginning_of_line = 0;
    $in_php = 0;
    $in_quote_html = 0;
    $in_backslash = 0;
    $in_quote = 0;
    $in_heredoc = 0;
    $in_heredoc_html = '';
    $heredoc = '';
    $all_lines = array();
    $php_lines = array();
    $html_lines = array();
    $quote_lines = array();
    $doublequote_lines = array();
    $comment_lines = array();
    $this_all_lines = '';
    $this_php_lines = '';
    $this_html_lines = '';
    $this_quote_lines = '';
    $this_doublequote_lines = '';
    $this_comment_lines = '';

    // parse the file:
    // - strip comments
    // - strip quote content // - strip stuff not in php // - break into lines
    $lineno = 0;
    for ($pos = 0; $pos < $content_length; $pos++) {

      // get the current character
      $char = $content[$pos];
      if ($char == "\n") {
        if ($in_comment && $in_comment == '/') {

          // end C++ style comments on newline
          $in_comment = 0;
        }

        // assume that html inside quotes doesn't span newlines
        $in_quote_html = 0;

        // remove blank lines now, so we avoid processing them over-and-over
        if ($this_all_lines != '') {
          if (trim($this_all_lines) != '') {
            $all_lines[$lineno] = $this_all_lines;
          }
          if (trim($this_php_lines) != '') {
            $php_lines[$lineno] = $this_php_lines;
          }
          if (trim($this_html_lines) != '') {
            $html_lines[$lineno] = $this_html_lines;
          }
          if (trim($this_quote_lines) != '') {
            $quote_lines[$lineno] = $this_quote_lines;
          }
          if (trim($this_doublequote_lines) != '') {
            $doublequote_lines[$lineno] = $this_doublequote_lines;
          }
          if (trim($this_comment_lines) != '') {
            $comment_lines[$lineno] = $this_comment_lines;
          }
        }

        // save this line and start a new line
        $lineno++;
        $this_all_lines = '';
        $this_php_lines = '';
        $this_html_lines = '';
        $this_quote_lines = '';
        $this_doublequote_lines = '';
        $this_comment_lines = '';
        $beginning_of_line = 1;
        continue;
      }
      if ($this_all_lines != '') {
        $beginning_of_line = 0;
      }
      $this_all_lines .= $char;
      if ($in_php) {

        // when in a quoted string, look for the trailing quote
        // strip characters in the string, replacing with '' or ""
        if ($in_quote) {
          if ($in_backslash) {
            $in_backslash = 0;
          }
          elseif ($char == '\\') {
            $in_backslash = 1;
          }
          elseif ($char == $in_quote && !$in_backslash) {
            $in_quote = 0;
          }
          elseif ($char == '<') {
            $in_quote_html = '>';
          }
          if ($in_quote) {
            $this_quote_lines .= $char;
            if ($in_quote == '"') {
              $this_doublequote_lines .= $char;
            }
            if ($in_quote_html) {
              $this_html_lines .= $char;
            }
          }
          if ($char == $in_quote_html) {
            $in_quote_html = 0;
          }
          unset($char);

          // NOTE: trailing char output with starting one
        }
        elseif ($in_heredoc) {
          if ($beginning_of_line && $char == $in_heredoc[0] && substr($content, $pos, $in_heredoc_length) == $in_heredoc) {
            $this_all_lines .= substr($content, $pos + 1, $in_heredoc_length - 1);
            $in_heredoc = 0;
            $pos += $in_heredoc_length;
          }
          elseif ($char == '<') {
            $in_heredoc_html = '>';
          }
          if ($in_heredoc && $in_heredoc_html) {
            $this_html_lines .= $char;
          }
          if ($in_heredoc_html && $char == $in_heredoc_html) {
            $in_heredoc_html = '';
          }
          unset($char);
        }
        elseif ($char == '?' && $content[$pos + 1] == '>') {
          unset($char);
          $in_php = 0;
          $this_all_lines .= '>';
          $pos++;
        }
        elseif ($in_comment) {
          $this_comment_lines .= $char;
          if ($in_comment == '*' && $char == '*' && $content[$pos + 1] == '/') {
            $in_comment = 0;
            $this_all_lines .= '/';
            $this_comment_lines .= '/';
            $pos++;
          }
          unset($char);

          // don't add comments to php output
        }
        else {
          switch ($char) {
            case '\'':
            case '"':
              if ($content[$pos - 1] != '\\') {
                $this_php_lines .= $char;
                $in_quote = $char;
              }
              break;
            case '/':
              $next_char = $content[$pos + 1];
              if ($next_char == '/' || $next_char == '*') {
                unset($char);
                $in_comment = $next_char;
                $this_all_lines .= $next_char;
                $this_comment_lines .= '/' . $next_char;
                $pos++;
              }
              break;
            case '<':
              if ($content[$pos + 1] == '<' && $content[$pos + 2] == '<') {
                unset($char);
                $this_all_lines .= '<<';

                // get the heredoc word
                // read until the end-of-line
                for ($pos += 3; $pos < $content_length; $pos++) {
                  $char = $content[$pos];
                  if ($char == "\n") {
                    $pos--;
                    if (preg_match('/^\\s*(\\w+)/', $heredoc, $match)) {
                      $in_heredoc = $match[1];
                      $in_heredoc_length = drupal_strlen($in_heredoc);
                    }
                    break;
                  }
                  $this_all_lines .= $char;
                  $heredoc .= $char;
                }
                $heredoc = '';

                // replace heredoc's with an empty string
                $this_php_lines .= '\'\'';
                unset($char);
              }
              break;
          }
        }
        if (isset($char)) {
          $this_php_lines .= $char;
        }
      }
      else {
        switch ($char) {
          case '<':
            if ($content[$pos + 1] == '?') {
              if ($content[$pos + 2] == ' ') {
                $in_php = 1;
                $this_all_lines .= '? ';
                $pos += 2;
              }
              elseif (substr($content, $pos + 2, 3) == 'php') {
                $in_php = 1;
                $this_all_lines .= '?php';
                $pos += 4;
              }
              break;
            }

          // FALTHROUGH
          default:
            $this_html_lines .= $char;
            break;
        }
      }
    }

    // add the files lines to the arguments
    $coder_args['#all_lines'] = $all_lines;
    $coder_args['#php_lines'] = $php_lines;
    $coder_args['#html_lines'] = $html_lines;
    $coder_args['#quote_lines'] = $quote_lines;
    $coder_args['#doublequote_lines'] = $doublequote_lines;
    $coder_args['#comment_lines'] = $comment_lines;
    return 1;
  }
}
function _coder_severity($severity_name, $default_value = 5) {

  // NOTE: implemented this way in hopes that it is faster than a php switch
  if (!isset($severity_names)) {
    $severity_names = array(
      'minor' => 1,
      'normal' => 5,
      'critical' => 9,
    );
  }
  if (isset($severity_names[$severity_name])) {
    return $severity_names[$severity_name];
  }
  return $default_value;
}
function _coder_severity_name($coder_args, $review, $rule) {

  // NOTE: warnings in php includes are suspicious because
  // php includes are frequently 3rd party products
  if (isset($coder_args['#php_minor']) && substr($coder_args['#filename'], -4) == '.php') {
    return 'minor';
  }

  // get the severity as defined by the rule
  if (isset($rule['#severity'])) {
    return $rule['#severity'];
  }

  // if it's not defined in the rule, then it can be defined by the review
  if (isset($review['#severity'])) {
    return $review['#severity'];
  }

  // use the default
  return 'normal';
}
function do_coder_review($coder_args, $review) {
  $results = array();
  if ($review['#rules']) {

    // get the review's severity, used when the rule severity is not defined
    $default_severity = _coder_severity($review['#severity']);
    foreach ($review['#rules'] as $rule) {

      // perform the review if above the user requested severity
      $severity = _coder_severity(isset($rule['#severity']) ? $rule['#severity'] : '', $default_severity);
      if ($severity >= $coder_args['#severity']) {
        if (isset($rule['#original'])) {

          // deprecated
          $lines = $coder_args['#all_lines'];
        }
        elseif (isset($rule['#source'])) {

          // all, html, comment, or php
          $source = '#' . $rule['#source'] . '_lines';
          $lines = $coder_args[$source];
        }
        else {
          $lines = $coder_args['#php_lines'];
        }
        if ($lines) {
          switch ($rule['#type']) {
            case 'regex':
              do_coder_review_regex($coder_args, $review, $rule, $lines, $results);
              break;
            case 'grep':
              do_coder_review_grep($coder_args, $review, $rule, $lines, $results);
              break;
            case 'grep_invert':
              do_coder_review_grep_invert($coder_args, $review, $rule, $lines, $results);
              break;
            case 'callback':
              do_coder_review_callback($coder_args, $review, $rule, $lines, $results);
              break;
          }
        }
      }
    }
  }
  return $results;
}
function do_coder_review_regex(&$coder_args, $review, $rule, $lines, &$results) {
  if (isset($rule['#value'])) {
    $regex = '/' . $rule['#value'] . '/';
    if (!isset($rule['#case-sensitive'])) {
      $regex .= 'i';
    }
    $function_regex = isset($rule['#function']) ? '/' . $rule['#function'] . '/' : '';
    $current_function = '';
    $paren = 0;
    $not_regex = isset($rule['#not']) ? '/' . $rule['#not'] . '/i' : '';
    foreach ($lines as $lineno => $line) {

      // some rules apply only within certain functions
      if ($function_regex) {
        if (preg_match('/function (\\w+)\\(/', $line, $match)) {
          $current_function = $match[1];
        }
        if (preg_match('/([{}])/', $line, $match)) {
          $paren += $match[0] == '{' ? 1 : -1;
        }
        if ($paren < 0 || $current_function == '' || !preg_match($function_regex, $current_function)) {
          continue;
        }
      }
      if (preg_match($regex, $line, $matches)) {

        // don't match some regex's
        if ($not_regex) {
          foreach ($matches as $match) {
            if (preg_match($not_regex, $match)) {
              continue 2;
            }
          }
        }
        $line = $coder_args['#all_lines'][$lineno];
        $severity_name = _coder_severity_name($coder_args, $review, $rule);
        _coder_error($results, $rule, $severity_name, $lineno, $line);
      }
    }
  }
}
function _coder_error(&$results, $rule, $severity_name, $lineno = -1, $line = '', $original = '') {
  if (isset($rule['#warning_callback'])) {
    if (function_exists($rule['#warning_callback'])) {
      $warning = $rule['#warning_callback']();
    }
    else {

      // if this happens, there is an error in the rule definition
      $warning = t('please <a href="@report">report</a> this !warning', array(
        '@report' => 'http://drupal.org/node/add/project_issue/coder/bug',
        '!warning' => $rule['#warning_callback'],
      ));
    }
  }
  else {
    $warning = t($rule['#warning']);
  }
  return _coder_error_msg($results, $warning, $severity_name, $lineno, $line);
}
function _coder_error_msg(&$results, $warning, $severity_name, $lineno = -1, $line = '') {

  // Note: The use of the $key allows multiple errors on one line.
  // This assumes that no line of source has more than 10000 lines of code
  // and that we have fewer than 10000 errors.
  global $_coder_errno;
  $key = ($lineno + 1) * 10000 + $_coder_errno++;
  $results[$key] = theme('coder_warning', $warning, $severity_name, $lineno + 1, $line);
  $results['#stats'][$severity_name]++;
}

/**
 * Searches for a string.
 */
function do_coder_review_grep(&$coder_args, $review, $rule, $lines, &$results) {
  if (isset($rule['#value'])) {
    foreach ($lines as $lineno => $line) {
      if (_coder_search_string($line, $rule)) {
        $line = $coder_args['#all_lines'][$lineno];
        $severity_name = _coder_severity_name($coder_args, $review, $rule);
        _coder_error($results, $rule, $severity_name, $lineno, $line);
      }
    }
  }
}

/**
 * Searches for potentially missing string.
 */
function do_coder_review_grep_invert(&$coder_args, $review, $rule, $lines, &$results) {
  if (isset($rule['#value'])) {
    foreach ($lines as $lineno => $line) {
      if (_coder_search_string($line, $rule)) {
        return;
      }
    }
    $severity_name = _coder_severity_name($coder_args, $review, $rule);
    _coder_error($results, $rule, $severity_name);
  }
}
function do_coder_review_callback(&$coder_args, $review, $rule, $lines, &$results) {
  if ($function = $rule['#value']) {
    if (function_exists($function)) {
      call_user_func_array($function, array(
        &$coder_args,
        $review,
        $rule,
        $lines,
        &$results,
      ));
    }
  }
}

/**
 * Search for a string.
 * 
 * Uses strpos() and stripos() if available for performance optimization or
 * preg_match().
 * 
 * @param string $line Haystack
 * @param array $rule Rule to process
 * 
 * @return bool True if needle is in haystack.
 */
function _coder_search_string($line, $rule) {
  static $php5;
  if (!isset($php5)) {
    if (function_exists('stripos')) {
      $php5 = true;
    }
    else {
      $php5 = false;
    }
  }

  // case-sensitive search with strpos() (supported everywhere)
  if (isset($rule['#case-sensitive'])) {
    return strpos($line, $rule['#value']) !== false;
  }

  // case-insensitive search with stripos() (supported in PHP 5)
  if ($php5 && !isset($rule['#case-sensitive'])) {
    return stripos($line, $rule['#value']) !== false;
  }

  // case-insensitive search
  $regex = '/' . preg_quote($rule['#value']) . '/i';
  return preg_match($regex, $line);
}
function _coder_is_drupal_core($module) {
  static $core;
  if (!isset($core)) {
    $core = array(
      // modules
      'aggregator' => 1,
      'block' => 1,
      'blog' => 1,
      'blogapi' => 1,
      'book' => 1,
      'color' => 1,
      'comment' => 1,
      'contact' => 1,
      'dblog' => 1,
      'drupal' => 1,
      'filter' => 1,
      'forum' => 1,
      'help' => 1,
      'locale' => 1,
      'menu' => 1,
      'node' => 1,
      'path' => 1,
      'php' => 1,
      'ping' => 1,
      'poll' => 1,
      'profile' => 1,
      'search' => 1,
      'statistics' => 1,
      'syslog' => 1,
      'system' => 1,
      'taxonomy' => 1,
      'throttle' => 1,
      'tracker' => 1,
      'upload' => 1,
      'user' => 1,
      // themes
      'bluemarine' => 1,
      'chameleon' => 1,
      'garland' => 1,
      'marvin' => 1,
      'minnelli' => 1,
      'pushbutton' => 1,
    );
  }
  return isset($core[$module->name]) ? 1 : 0;
}

/**
 * Theming functions below...
 */
function theme_coder($name, $filename, $results) {
  $output = '<div class="coder"><h2>' . basename($filename) . '</h2>';
  if (!empty($results)) {
    $output .= theme('item_list', $results);
  }
  $output .= '</div>';
  return $output;
}
function theme_coder_warning($warning, $severity_name, $lineno = 0, $line = '') {

  // Extract description from warning
  if (is_array($warning)) {
    $description = $warning['#description'];
    $link = $warning['#link'];
    $warning = $warning['#warning'];
    if (isset($link)) {
      $warning .= '  (' . l('Drupal Docs', $link) . ')';
    }
  }
  if ($lineno) {
    $warning = t('Line @number: !warning', array(
      '@number' => $lineno,
      '!warning' => $warning,
    ));
    if ($line) {
      $warning .= '<pre>' . check_plain($line) . '</pre>';
    }
  }
  $class = 'coder-warning';
  if ($severity_name) {
    $class .= " coder-{$severity_name}";
  }
  $path = drupal_get_path('module', 'coder');
  $title = t('severity: @severity', array(
    '@severity' => $severity_name,
  ));
  $img = theme('image', $path . "/images/{$severity_name}.png", $title, $title, array(
    'align' => 'right',
    'class' => 'coder',
  ), false);
  if (isset($description)) {
    $img .= theme('image', $path . '/images/more.png', t('click to read more'), '', array(
      'align' => 'right',
      'class' => 'coder-more',
    ), false);
    $warning .= '<div class="coder-description">Explanation: ' . $description . '</div>';
  }
  return '<div class="' . $class . '">' . $img . $warning . '</div>';
}
function theme_drupalapi($function, $version = 'HEAD') {
  return l($function, "http://api.drupal.org/api/{$version}/function/{$function}");
}
function theme_phpapi($function) {
  return l($function, "http://us.php.net/{$function}");
}